A hands-on introduction to ChIP-Seq analysis
Introduction
Getting started
Logging into your HPC accounts
Acquiring files for the tutorial
Alignment using Bowtie-2
Launching IGV
Adding your alignments as new feature tracks
Peak finding with MACS
Analysing the results
Identifying a core motif using MEME
Revisiting the ASR1 analysis
A further example for homework - Human data!
A hands-on introduction to ChIP-Seq analysis
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A hands-on introduction to ChIP-Seq!
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A hands-on introduction to ChIP-Seq!
¶
Introduction
Getting started
Logging into your HPC accounts
Acquiring files for the tutorial
Alignment using Bowtie-2
Launching IGV
Adding your alignments as new feature tracks
Peak finding with MACS
Analysing the results
Identifying a core motif using MEME
Revisiting the ASR1 analysis
A further example for homework - Human data!
Indices and tables
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Index
Module Index
Search Page